PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.1374s0010.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family NAC
Protein Properties Length: 519aa    MW: 57940.9 Da    PI: 4.4896
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.1374s0010.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM71.81.8e-2221122128
                     NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88 
                               Gf+F+P+de   ++yL +k++g+ ++    i++v+++++eP++Lp          yfF++rd +   gk ++r+tk+g Wk+t +
  SapurV1A.1374s0010.1.p   2 EYGFQFQPSDELCFSKYLVPKTRGDIMKG-FPIEDVNLCEHEPRNLP---------EYFFCPRDLR---GKTHRRKTKAGNWKQTSE 75 
                             57************************999.56**************9.........4******986...667889999********* PP

                     NAM  89 dkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                             dk+++++ +++++g+ +tL fy+     +++t W++ e+ l
  SapurV1A.1374s0010.1.p  76 DKSIMAEgTENEIGVMRTLRFYE----GAVRTGWMIYEFDL 112
                             ******966778**********5....456899*****986 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100524.5121132IPR003441NAC domain
SuperFamilySSF1019411.44E-233129IPR003441NAC domain
PfamPF023652.3E-153112IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 519 aa     Download sequence    Send to blast
MEYGFQFQPS DELCFSKYLV PKTRGDIMKG FPIEDVNLCE HEPRNLPEYF FCPRDLRGKT  60
HRRKTKAGNW KQTSEDKSIM AEGTENEIGV MRTLRFYEGA VRTGWMIYEF DLISEPSLFQ  120
KGQYVLCKLE SDSKGVKSKK RKRSHRIAPV SRSEVEPSQS MDSDSQNINP SEMAVNSPCD  180
ESGLSHHVGL QFGNQNSGEL MNSSARQFSE FSHHRTSEFR NQISDNLMSD LVHDGSGSSH  240
STVFNRENQY WNQPTVDSAY NGSESPCMAF DSETQTPNEL PAVDSAYNVT RNPGMAFDLA  300
NQNPNVLLTA DSASNFVSES RHMTFDPANQ TPSVLLTADN SASNVSGSHY MAFDLANKNL  360
CNSISFLDCE NSLMASRGEI GNSMVMPFSF INQSTYDKSE PSSLIPSFDF DYQNQSKEID  420
ISAFVEGVWS NITATSPDFV NQNPCKKPDM SAALEEDYSS YSEPFFSYSY QADLSLPEVN  480
PGPQAGIEGC FEEENIPNPA HFQLPACMEE NHSFMGGL*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1138143KKRKRS
2139144KRKRSH
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011035214.10.0PREDICTED: NAC domain-containing protein 45-like isoform X2
TrEMBLB9IC630.0B9IC63_POPTR; Uncharacterized protein
TrEMBLB9IC660.0B9IC66_POPTR; Uncharacterized protein
STRINGPOPTR_0014s07200.10.0(Populus trichocarpa)
STRINGPOPTR_0014s07220.10.0(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1900836
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24430.22e-18NAC domain containing protein 38